Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Q3KNL4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.65□□□□□ -0.38
Q3KNL4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.65□□□□□ -0.38
Q3KNL4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Gm44397-201ENSMUST00000195950 113 ntBASIC12.65□□□□□ -0.38
Q3KNL4 Itm2b-204ENSMUST00000228637 783 ntBASIC12.65□□□□□ -0.38
Q3KNL4 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Q3KNL4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.65□□□□□ -0.38
Q3KNL4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.65□□□□□ -0.38
Q3KNL4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Q3KNL4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Q3KNL4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Q3KNL4 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Q3KNL4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Q3KNL4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Q3KNL4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Q3KNL4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.64□□□□□ -0.39
Q3KNL4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Q3KNL4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Gm16202-201ENSMUST00000117532 544 ntBASIC12.64□□□□□ -0.39
Q3KNL4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.64□□□□□ -0.39
Q3KNL4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Q3KNL4 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.64□□□□□ -0.39
Q3KNL4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.64□□□□□ -0.39
Q3KNL4 Gm6458-201ENSMUST00000211573 635 ntBASIC12.64□□□□□ -0.39
Q3KNL4 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.64□□□□□ -0.39
Q3KNL4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.64□□□□□ -0.39
Q3KNL4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Q3KNL4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Q3KNL4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Q3KNL4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Q3KNL4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.63□□□□□ -0.39
Q3KNL4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
Q3KNL4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.63□□□□□ -0.39
Q3KNL4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Q3KNL4 Gm37917-201ENSMUST00000194711 392 ntBASIC12.63□□□□□ -0.39
Q3KNL4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.63□□□□□ -0.39
Q3KNL4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Q3KNL4 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.63□□□□□ -0.39
Q3KNL4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.63□□□□□ -0.39
Q3KNL4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Q3KNL4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Q3KNL4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Q3KNL4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Q3KNL4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.63□□□□□ -0.39
Q3KNL4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Q3KNL4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Q3KNL4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Q3KNL4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Q3KNL4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3KNL4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms