Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim63Q38HM4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.54□□□□□ -0.72
Trim63Q38HM4 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.54□□□□□ -0.72
Trim63Q38HM4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trim63Q38HM4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.54□□□□□ -0.72
Trim63Q38HM4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.54□□□□□ -0.72
Trim63Q38HM4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim63Q38HM4 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.53□□□□□ -0.72
Trim63Q38HM4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gm8097-201ENSMUST00000117903 829 ntBASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gm9013-201ENSMUST00000132939 882 ntBASIC10.53□□□□□ -0.72
Trim63Q38HM4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gm27646-201ENSMUST00000183989 110 ntBASIC10.53□□□□□ -0.72
Trim63Q38HM4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gm44608-201ENSMUST00000206827 855 ntBASIC10.53□□□□□ -0.72
Trim63Q38HM4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gm45925-201ENSMUST00000218882 744 ntBASIC10.53□□□□□ -0.72
Trim63Q38HM4 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim63Q38HM4 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms