Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Gm43094-201ENSMUST00000196549 921 ntBASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ptchd3Q0EEE2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm12403-201ENSMUST00000121384 959 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Mir6977-201ENSMUST00000184960 64 ntBASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ptchd3Q0EEE2 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Gm12485-201ENSMUST00000119641 291 ntBASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Gm2423-201ENSMUST00000074863 733 ntBASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ptchd3Q0EEE2 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms