Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.35□□□□□ -0.43
Hoxc4Q08624 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.35□□□□□ -0.43
Hoxc4Q08624 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.35□□□□□ -0.43
Hoxc4Q08624 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.35□□□□□ -0.43
Hoxc4Q08624 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.35□□□□□ -0.43
Hoxc4Q08624 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc4Q08624 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.34□□□□□ -0.43
Hoxc4Q08624 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gm12314-201ENSMUST00000118104 538 ntBASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gm15808-201ENSMUST00000119046 604 ntBASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gm3096-201ENSMUST00000185770 364 ntBASIC12.34□□□□□ -0.43
Hoxc4Q08624 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gm8885-201ENSMUST00000189382 598 ntBASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.34□□□□□ -0.43
Hoxc4Q08624 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.34□□□□□ -0.43
Hoxc4Q08624 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxc4Q08624 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.33□□□□□ -0.43
Hoxc4Q08624 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hoxc4Q08624 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Hoxc4Q08624 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Gm24830-201ENSMUST00000102024 166 ntBASIC12.33□□□□□ -0.44
Hoxc4Q08624 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Hoxc4Q08624 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms