Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ebf1Q07802 Gm14726-201ENSMUST00000120623 896 ntBASIC13.06□□□□□ -0.32
Ebf1Q07802 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.06□□□□□ -0.32
Ebf1Q07802 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ebf1Q07802 Gm28693-202ENSMUST00000190758 331 ntBASIC13.06□□□□□ -0.32
Ebf1Q07802 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ebf1Q07802 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.06□□□□□ -0.32
Ebf1Q07802 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ebf1Q07802 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ebf1Q07802 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Ebf1Q07802 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.06□□□□□ -0.32
Ebf1Q07802 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf1Q07802 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.05□□□□□ -0.32
Ebf1Q07802 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.05□□□□□ -0.32
Ebf1Q07802 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Gm3786-201ENSMUST00000202659 378 ntBASIC13.05□□□□□ -0.32
Ebf1Q07802 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.05□□□□□ -0.32
Ebf1Q07802 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.05□□□□□ -0.32
Ebf1Q07802 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ebf1Q07802 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Ebf1Q07802 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Ebf1Q07802 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ebf1Q07802 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.04□□□□□ -0.32
Ebf1Q07802 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.04□□□□□ -0.32
Ebf1Q07802 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.04□□□□□ -0.32
Ebf1Q07802 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.04□□□□□ -0.32
Ebf1Q07802 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Ebf1Q07802 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.04□□□□□ -0.32
Ebf1Q07802 Gm37042-201ENSMUST00000193816 581 ntBASIC13.04□□□□□ -0.32
Ebf1Q07802 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.04□□□□□ -0.32
Ebf1Q07802 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.04□□□□□ -0.32
Ebf1Q07802 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.04□□□□□ -0.32
Ebf1Q07802 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ebf1Q07802 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.04□□□□□ -0.32
Ebf1Q07802 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Ebf1Q07802 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ebf1Q07802 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ebf1Q07802 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.04□□□□□ -0.32
Ebf1Q07802 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ebf1Q07802 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms