Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col9a2Q07643 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col9a2Q07643 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.92□□□□□ -0.18
Col9a2Q07643 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col9a2Q07643 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.91□□□□□ -0.18
Col9a2Q07643 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Gm24845-201ENSMUST00000158034 109 ntBASIC13.91□□□□□ -0.18
Col9a2Q07643 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.91□□□□□ -0.18
Col9a2Q07643 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Gm45186-201ENSMUST00000206874 478 ntBASIC13.91□□□□□ -0.18
Col9a2Q07643 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.91□□□□□ -0.18
Col9a2Q07643 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col9a2Q07643 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.9□□□□□ -0.18
Col9a2Q07643 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Gm11222-201ENSMUST00000119005 738 ntBASIC13.9□□□□□ -0.18
Col9a2Q07643 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.9□□□□□ -0.18
Col9a2Q07643 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.9□□□□□ -0.18
Col9a2Q07643 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.9□□□□□ -0.18
Col9a2Q07643 Gm44967-201ENSMUST00000207047 631 ntBASIC13.9□□□□□ -0.18
Col9a2Q07643 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.9□□□□□ -0.18
Col9a2Q07643 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.9□□□□□ -0.18
Col9a2Q07643 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.9□□□□□ -0.18
Col9a2Q07643 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Col9a2Q07643 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Col9a2Q07643 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Col9a2Q07643 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col9a2Q07643 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.9□□□□□ -0.18
Col9a2Q07643 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col9a2Q07643 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Col9a2Q07643 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col9a2Q07643 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col9a2Q07643 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms