Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Gm12390-201ENSMUST00000117897 397 ntBASIC9.98□□□□□ -0.81
Cdx4Q07424 Mir1982-201ENSMUST00000157368 74 ntBASIC9.98□□□□□ -0.81
Cdx4Q07424 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.98□□□□□ -0.81
Cdx4Q07424 Gm29649-201ENSMUST00000185649 419 ntBASIC9.98□□□□□ -0.81
Cdx4Q07424 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.98□□□□□ -0.81
Cdx4Q07424 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC9.98□□□□□ -0.81
Cdx4Q07424 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
Cdx4Q07424 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.98□□□□□ -0.81
Cdx4Q07424 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.98□□□□□ -0.81
Cdx4Q07424 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Cdx4Q07424 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Cdx4Q07424 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Cdx4Q07424 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Cdx4Q07424 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.98□□□□□ -0.81
Cdx4Q07424 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Cdx4Q07424 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx4Q07424 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm12537-201ENSMUST00000119266 1002 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm12070-201ENSMUST00000119551 1002 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm12671-201ENSMUST00000119978 1002 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm13292-201ENSMUST00000120014 1000 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm12403-201ENSMUST00000121384 959 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC9.97□□□□□ -0.81
Cdx4Q07424 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm10359-201ENSMUST00000180167 1002 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm12033-201ENSMUST00000180654 1002 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm5559-201ENSMUST00000180755 1002 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Mir7085-201ENSMUST00000184353 66 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm18473-201ENSMUST00000220543 868 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 AC125350.2-201ENSMUST00000224737 727 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm9899-201ENSMUST00000065519 555 ntBASIC9.97□□□□□ -0.81
Cdx4Q07424 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Cdx4Q07424 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms