Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.32□□□□□ -0.6
Thbs3Q05895 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.32□□□□□ -0.6
Thbs3Q05895 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.32□□□□□ -0.6
Thbs3Q05895 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Gm19163-201ENSMUST00000223313 780 ntBASIC11.32□□□□□ -0.6
Thbs3Q05895 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Thbs3Q05895 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Thbs3Q05895 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.32□□□□□ -0.6
Thbs3Q05895 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.32□□□□□ -0.6
Thbs3Q05895 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Thbs3Q05895 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Thbs3Q05895 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.32□□□□□ -0.6
Thbs3Q05895 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Thbs3Q05895 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.32□□□□□ -0.6
Thbs3Q05895 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Thbs3Q05895 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Thbs3Q05895 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.31□□□□□ -0.6
Thbs3Q05895 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Gm22121-201ENSMUST00000175148 54 ntBASIC11.31□□□□□ -0.6
Thbs3Q05895 Gm26927-201ENSMUST00000182385 965 ntBASIC11.31□□□□□ -0.6
Thbs3Q05895 Gm18187-201ENSMUST00000196476 984 ntBASIC11.31□□□□□ -0.6
Thbs3Q05895 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.31□□□□□ -0.6
Thbs3Q05895 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.31□□□□□ -0.6
Thbs3Q05895 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.31□□□□□ -0.6
Thbs3Q05895 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.31□□□□□ -0.6
Thbs3Q05895 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.31□□□□□ -0.6
Thbs3Q05895 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Thbs3Q05895 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.3□□□□□ -0.6
Thbs3Q05895 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thbs3Q05895 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thbs3Q05895 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thbs3Q05895 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Thbs3Q05895 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.3□□□□□ -0.6
Thbs3Q05895 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thbs3Q05895 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Thbs3Q05895 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thbs3Q05895 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Thbs3Q05895 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Thbs3Q05895 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thbs3Q05895 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.3□□□□□ -0.6
Thbs3Q05895 Gm16177-201ENSMUST00000120728 718 ntBASIC11.3□□□□□ -0.6
Thbs3Q05895 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Thbs3Q05895 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thbs3Q05895 Gm23363-201ENSMUST00000175024 79 ntBASIC11.3□□□□□ -0.6
Thbs3Q05895 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Thbs3Q05895 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.3□□□□□ -0.6
Thbs3Q05895 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.3□□□□□ -0.6
Thbs3Q05895 Gm6266-201ENSMUST00000203844 806 ntBASIC11.3□□□□□ -0.6
Thbs3Q05895 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.3□□□□□ -0.6
Thbs3Q05895 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.3□□□□□ -0.6
Thbs3Q05895 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.3□□□□□ -0.6
Thbs3Q05895 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms