Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Gm12241-201ENSMUST00000118330 726 ntBASIC12.85□□□□□ -0.35
Col6a2Q02788 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Gm37489-201ENSMUST00000191883 159 ntBASIC12.85□□□□□ -0.35
Col6a2Q02788 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.85□□□□□ -0.35
Col6a2Q02788 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.85□□□□□ -0.35
Col6a2Q02788 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC12.85□□□□□ -0.35
Col6a2Q02788 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a2Q02788 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.85□□□□□ -0.35
Col6a2Q02788 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a2Q02788 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Gm13786-201ENSMUST00000122371 333 ntBASIC12.84□□□□□ -0.35
Col6a2Q02788 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Gm23363-201ENSMUST00000175024 79 ntBASIC12.84□□□□□ -0.35
Col6a2Q02788 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.84□□□□□ -0.35
Col6a2Q02788 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Gm8099-201ENSMUST00000200510 742 ntBASIC12.84□□□□□ -0.35
Col6a2Q02788 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.84□□□□□ -0.35
Col6a2Q02788 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.84□□□□□ -0.35
Col6a2Q02788 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.84□□□□□ -0.35
Col6a2Q02788 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Col6a2Q02788 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a2Q02788 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Col6a2Q02788 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Col6a2Q02788 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a2Q02788 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a2Q02788 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Col6a2Q02788 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.83□□□□□ -0.35
Col6a2Q02788 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a2Q02788 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.83□□□□□ -0.35
Col6a2Q02788 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a2Q02788 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms