Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Smn1P97801 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Smn1P97801 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.03□□□□□ -0.64
Smn1P97801 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.03□□□□□ -0.64
Smn1P97801 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Smn1P97801 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.03□□□□□ -0.64
Smn1P97801 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.03□□□□□ -0.64
Smn1P97801 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.03□□□□□ -0.64
Smn1P97801 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.03□□□□□ -0.64
Smn1P97801 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.03□□□□□ -0.64
Smn1P97801 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.03□□□□□ -0.64
Smn1P97801 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smn1P97801 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smn1P97801 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Smn1P97801 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smn1P97801 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Smn1P97801 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Smn1P97801 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smn1P97801 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smn1P97801 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smn1P97801 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.02□□□□□ -0.64
Smn1P97801 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smn1P97801 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Smn1P97801 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Smn1P97801 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Smn1P97801 Gm11524-201ENSMUST00000119349 807 ntBASIC11.02□□□□□ -0.65
Smn1P97801 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Smn1P97801 Gm26308-201ENSMUST00000157768 69 ntBASIC11.02□□□□□ -0.65
Smn1P97801 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.02□□□□□ -0.65
Smn1P97801 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.02□□□□□ -0.65
Smn1P97801 Gm19078-201ENSMUST00000206311 727 ntBASIC11.02□□□□□ -0.65
Smn1P97801 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.02□□□□□ -0.65
Smn1P97801 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.02□□□□□ -0.65
Smn1P97801 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Smn1P97801 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Smn1P97801 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smn1P97801 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.01□□□□□ -0.65
Smn1P97801 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.01□□□□□ -0.65
Smn1P97801 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.01□□□□□ -0.65
Smn1P97801 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.01□□□□□ -0.65
Smn1P97801 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smn1P97801 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms