Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.88□□□□□ -0.51
Cacna1aP97445 Gm15547-201ENSMUST00000122152 333 ntBASIC11.88□□□□□ -0.51
Cacna1aP97445 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.88□□□□□ -0.51
Cacna1aP97445 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Gm7666-201ENSMUST00000146631 819 ntBASIC11.88□□□□□ -0.51
Cacna1aP97445 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.88□□□□□ -0.51
Cacna1aP97445 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cacna1aP97445 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.88□□□□□ -0.51
Cacna1aP97445 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cacna1aP97445 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.87□□□□□ -0.51
Cacna1aP97445 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Gm17391-201ENSMUST00000171036 126 ntBASIC11.87□□□□□ -0.51
Cacna1aP97445 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.87□□□□□ -0.51
Cacna1aP97445 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.87□□□□□ -0.51
Cacna1aP97445 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.87□□□□□ -0.51
Cacna1aP97445 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.87□□□□□ -0.51
Cacna1aP97445 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.87□□□□□ -0.51
Cacna1aP97445 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.87□□□□□ -0.51
Cacna1aP97445 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Gm9211-201ENSMUST00000182882 975 ntBASIC11.87□□□□□ -0.51
Cacna1aP97445 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Rprl1-202ENSMUST00000198476 238 ntBASIC11.87□□□□□ -0.51
Cacna1aP97445 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.87□□□□□ -0.51
Cacna1aP97445 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.87□□□□□ -0.51
Cacna1aP97445 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.87□□□□□ -0.51
Cacna1aP97445 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cacna1aP97445 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cacna1aP97445 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cacna1aP97445 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.86□□□□□ -0.51
Cacna1aP97445 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.86□□□□□ -0.51
Cacna1aP97445 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.86□□□□□ -0.51
Cacna1aP97445 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cacna1aP97445 Gm10051-201ENSMUST00000145209 414 ntBASIC11.86□□□□□ -0.51
Cacna1aP97445 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cacna1aP97445 Gm25700-201ENSMUST00000177693 110 ntBASIC11.86□□□□□ -0.51
Cacna1aP97445 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cacna1aP97445 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms