Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Gm14921-201ENSMUST00000118643 908 ntBASIC14□□□□□ -0.17
Trim43cP86449 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14□□□□□ -0.17
Trim43cP86449 Gm25261-201ENSMUST00000157416 134 ntBASIC14□□□□□ -0.17
Trim43cP86449 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Trim43cP86449 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Gm38230-201ENSMUST00000193572 1159 ntBASIC14□□□□□ -0.17
Trim43cP86449 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim43cP86449 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim43cP86449 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim43cP86449 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Rnf17-202ENSMUST00000223627 2077 ntBASIC14□□□□□ -0.17
Trim43cP86449 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Gm17435-202ENSMUST00000212699 1998 ntBASIC14□□□□□ -0.17
Trim43cP86449 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
Trim43cP86449 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.99□□□□□ -0.17
Trim43cP86449 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim43cP86449 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.99□□□□□ -0.17
Trim43cP86449 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
Trim43cP86449 Gm14660-201ENSMUST00000119809 575 ntBASIC13.99□□□□□ -0.17
Trim43cP86449 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.99□□□□□ -0.17
Trim43cP86449 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.99□□□□□ -0.17
Trim43cP86449 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim43cP86449 Gm26185-201ENSMUST00000157692 266 ntBASIC13.99□□□□□ -0.17
Trim43cP86449 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trim43cP86449 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.99□□□□□ -0.17
Trim43cP86449 Gm8099-201ENSMUST00000200510 742 ntBASIC13.99□□□□□ -0.17
Trim43cP86449 Gm43818-201ENSMUST00000200605 466 ntBASIC13.99□□□□□ -0.17
Trim43cP86449 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trim43cP86449 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Gm10268-201ENSMUST00000085340 555 ntBASIC13.99□□□□□ -0.17
Trim43cP86449 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim43cP86449 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim43cP86449 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43cP86449 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Trim43cP86449 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.98□□□□□ -0.17
Trim43cP86449 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim43cP86449 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trim43cP86449 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim43cP86449 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Trim43cP86449 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Gm13226-201ENSMUST00000117838 404 ntBASIC13.98□□□□□ -0.17
Trim43cP86449 Gm13829-201ENSMUST00000119600 138 ntBASIC13.98□□□□□ -0.17
Trim43cP86449 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim43cP86449 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim43cP86449 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.98□□□□□ -0.17
Trim43cP86449 Gm6222-202ENSMUST00000182143 629 ntBASIC13.98□□□□□ -0.17
Trim43cP86449 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.98□□□□□ -0.17
Trim43cP86449 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.98□□□□□ -0.17
Trim43cP86449 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim43cP86449 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim43cP86449 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43cP86449 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43cP86449 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms