Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Lsm5P62322 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.7□□□□□ -0.7
Lsm5P62322 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.7□□□□□ -0.7
Lsm5P62322 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Lsm5P62322 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Lsm5P62322 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Lsm5P62322 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.7□□□□□ -0.7
Lsm5P62322 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.7□□□□□ -0.7
Lsm5P62322 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Lsm5P62322 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Lsm5P62322 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Lsm5P62322 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.69□□□□□ -0.7
Lsm5P62322 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.69□□□□□ -0.7
Lsm5P62322 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.69□□□□□ -0.7
Lsm5P62322 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.69□□□□□ -0.7
Lsm5P62322 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.69□□□□□ -0.7
Lsm5P62322 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.69□□□□□ -0.7
Lsm5P62322 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.69□□□□□ -0.7
Lsm5P62322 Gm29541-201ENSMUST00000191351 678 ntBASIC10.69□□□□□ -0.7
Lsm5P62322 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.69□□□□□ -0.7
Lsm5P62322 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.69□□□□□ -0.7
Lsm5P62322 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Gm5425-201ENSMUST00000214125 459 ntBASIC10.69□□□□□ -0.7
Lsm5P62322 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Lsm5P62322 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.69□□□□□ -0.7
Lsm5P62322 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.69□□□□□ -0.7
Lsm5P62322 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Lsm5P62322 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.69□□□□□ -0.7
Lsm5P62322 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.69□□□□□ -0.7
Lsm5P62322 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm5P62322 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.68□□□□□ -0.7
Lsm5P62322 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.68□□□□□ -0.7
Lsm5P62322 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm5P62322 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms