Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cks1bP61025 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cks1bP61025 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.21□□□□□ -0.94
Cks1bP61025 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.21□□□□□ -0.94
Cks1bP61025 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1bP61025 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.21□□□□□ -0.94
Cks1bP61025 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Cks1bP61025 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cks1bP61025 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Cks1bP61025 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.2□□□□□ -0.94
Cks1bP61025 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.2□□□□□ -0.94
Cks1bP61025 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.2□□□□□ -0.94
Cks1bP61025 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.2□□□□□ -0.94
Cks1bP61025 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.2□□□□□ -0.94
Cks1bP61025 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cks1bP61025 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Cks1bP61025 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC9.2□□□□□ -0.94
Cks1bP61025 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.2□□□□□ -0.94
Cks1bP61025 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.2□□□□□ -0.94
Cks1bP61025 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Cks1bP61025 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.2□□□□□ -0.94
Cks1bP61025 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.2□□□□□ -0.94
Cks1bP61025 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC9.2□□□□□ -0.94
Cks1bP61025 Gm45683-201ENSMUST00000210825 1247 ntBASIC9.2□□□□□ -0.94
Cks1bP61025 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Cks1bP61025 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Cks1bP61025 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.2□□□□□ -0.94
Cks1bP61025 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Cks1bP61025 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Cks1bP61025 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cks1bP61025 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Btrc-209ENSMUST00000224478 2194 ntBASIC9.2□□□□□ -0.94
Cks1bP61025 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Cks1bP61025 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.2□□□□□ -0.94
Cks1bP61025 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cks1bP61025 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1bP61025 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Cks1bP61025 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Cks1bP61025 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Cks1bP61025 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Cks1bP61025 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cks1bP61025 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cks1bP61025 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Cks1bP61025 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Cks1bP61025 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Cks1bP61025 Mir874-201ENSMUST00000104769 76 ntBASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms