Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Sf3b6P59708 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.44□□□□□ -0.58
Sf3b6P59708 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3b6P59708 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sf3b6P59708 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sf3b6P59708 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Gm4875-201ENSMUST00000118257 786 ntBASIC11.43□□□□□ -0.58
Sf3b6P59708 Gm12485-201ENSMUST00000119641 291 ntBASIC11.43□□□□□ -0.58
Sf3b6P59708 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Gm14719-201ENSMUST00000121891 340 ntBASIC11.43□□□□□ -0.58
Sf3b6P59708 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Gm27437-201ENSMUST00000183429 107 ntBASIC11.43□□□□□ -0.58
Sf3b6P59708 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Gm7063-201ENSMUST00000186840 981 ntBASIC11.43□□□□□ -0.58
Sf3b6P59708 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.43□□□□□ -0.58
Sf3b6P59708 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.43□□□□□ -0.58
Sf3b6P59708 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.43□□□□□ -0.58
Sf3b6P59708 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sf3b6P59708 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3b6P59708 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.42□□□□□ -0.58
Sf3b6P59708 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.42□□□□□ -0.58
Sf3b6P59708 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sf3b6P59708 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.42□□□□□ -0.58
Sf3b6P59708 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sf3b6P59708 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sf3b6P59708 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.42□□□□□ -0.58
Sf3b6P59708 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Sf3b6P59708 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.42□□□□□ -0.58
Sf3b6P59708 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Sf3b6P59708 Gm15487-201ENSMUST00000122373 465 ntBASIC11.42□□□□□ -0.58
Sf3b6P59708 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.42□□□□□ -0.58
Sf3b6P59708 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Sf3b6P59708 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.42□□□□□ -0.58
Sf3b6P59708 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3b6P59708 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.42□□□□□ -0.58
Sf3b6P59708 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.42□□□□□ -0.58
Sf3b6P59708 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms