Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.38□□□□□ -0.11
Tpm1P58771 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.38□□□□□ -0.11
Tpm1P58771 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tpm1P58771 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.37□□□□□ -0.11
Tpm1P58771 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm1P58771 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm1P58771 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm1P58771 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.37□□□□□ -0.11
Tpm1P58771 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.37□□□□□ -0.11
Tpm1P58771 Gm17837-201ENSMUST00000186435 985 ntBASIC14.37□□□□□ -0.11
Tpm1P58771 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Tpm1P58771 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.37□□□□□ -0.11
Tpm1P58771 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm1P58771 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.37□□□□□ -0.11
Tpm1P58771 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tpm1P58771 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm1P58771 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.37□□□□□ -0.11
Tpm1P58771 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.37□□□□□ -0.11
Tpm1P58771 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Tpm1P58771 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tpm1P58771 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Tpm1P58771 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tpm1P58771 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Tpm1P58771 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.36□□□□□ -0.11
Tpm1P58771 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.36□□□□□ -0.11
Tpm1P58771 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tpm1P58771 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.36□□□□□ -0.11
Tpm1P58771 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tpm1P58771 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tpm1P58771 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.36□□□□□ -0.11
Tpm1P58771 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tpm1P58771 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Tpm1P58771 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tpm1P58771 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Tpm1P58771 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.35□□□□□ -0.11
Tpm1P58771 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Gm4875-201ENSMUST00000118257 786 ntBASIC14.35□□□□□ -0.11
Tpm1P58771 Gm13453-201ENSMUST00000118708 357 ntBASIC14.35□□□□□ -0.11
Tpm1P58771 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Tpm1P58771 Gm8396-201ENSMUST00000057361 823 ntBASIC14.35□□□□□ -0.11
Tpm1P58771 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tpm1P58771 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms