Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.41□□□□□ -0.74
Sssca1P56873 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sssca1P56873 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.41□□□□□ -0.74
Sssca1P56873 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.41□□□□□ -0.74
Sssca1P56873 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sssca1P56873 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.41□□□□□ -0.74
Sssca1P56873 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.4□□□□□ -0.74
Sssca1P56873 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.4□□□□□ -0.74
Sssca1P56873 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Sssca1P56873 Gm6447-201ENSMUST00000118905 835 ntBASIC10.4□□□□□ -0.74
Sssca1P56873 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.4□□□□□ -0.74
Sssca1P56873 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sssca1P56873 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.4□□□□□ -0.74
Sssca1P56873 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.4□□□□□ -0.74
Sssca1P56873 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.4□□□□□ -0.74
Sssca1P56873 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.4□□□□□ -0.74
Sssca1P56873 Gm20445-201ENSMUST00000061905 565 ntBASIC10.4□□□□□ -0.74
Sssca1P56873 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Sssca1P56873 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sssca1P56873 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.4□□□□□ -0.74
Sssca1P56873 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Sssca1P56873 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Sssca1P56873 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sssca1P56873 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sssca1P56873 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sssca1P56873 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sssca1P56873 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.75
Sssca1P56873 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
Sssca1P56873 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Sssca1P56873 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.4□□□□□ -0.75
Sssca1P56873 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.39□□□□□ -0.75
Sssca1P56873 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Sssca1P56873 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Sssca1P56873 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.39□□□□□ -0.75
Sssca1P56873 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Gm43575-201ENSMUST00000196420 516 ntBASIC10.39□□□□□ -0.75
Sssca1P56873 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.39□□□□□ -0.75
Sssca1P56873 Gm26315-201ENSMUST00000083890 321 ntBASIC10.39□□□□□ -0.75
Sssca1P56873 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.39□□□□□ -0.75
Sssca1P56873 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Sssca1P56873 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.39□□□□□ -0.75
Sssca1P56873 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms