Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdx1P52946 Mir1982-201ENSMUST00000157368 74 ntBASIC12.73□□□□□ -0.37
Pdx1P52946 Gm45784-201ENSMUST00000188360 142 ntBASIC12.73□□□□□ -0.37
Pdx1P52946 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.73□□□□□ -0.37
Pdx1P52946 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdx1P52946 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.73□□□□□ -0.37
Pdx1P52946 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pdx1P52946 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pdx1P52946 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pdx1P52946 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Pdx1P52946 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.73□□□□□ -0.37
Pdx1P52946 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdx1P52946 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Pdx1P52946 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdx1P52946 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.72□□□□□ -0.37
Pdx1P52946 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pdx1P52946 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pdx1P52946 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.72□□□□□ -0.37
Pdx1P52946 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pdx1P52946 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Gm12384-201ENSMUST00000119228 919 ntBASIC12.72□□□□□ -0.37
Pdx1P52946 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.72□□□□□ -0.37
Pdx1P52946 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pdx1P52946 Gm4768-201ENSMUST00000206199 686 ntBASIC12.72□□□□□ -0.37
Pdx1P52946 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.72□□□□□ -0.37
Pdx1P52946 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Gm25857-201ENSMUST00000082788 129 ntBASIC12.72□□□□□ -0.37
Pdx1P52946 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Pdx1P52946 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Pdx1P52946 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.72□□□□□ -0.37
Pdx1P52946 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdx1P52946 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pdx1P52946 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pdx1P52946 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.71□□□□□ -0.37
Pdx1P52946 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.71□□□□□ -0.37
Pdx1P52946 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.71□□□□□ -0.37
Pdx1P52946 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.71□□□□□ -0.37
Pdx1P52946 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pdx1P52946 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pdx1P52946 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pdx1P52946 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pdx1P52946 Gm13813-201ENSMUST00000120998 787 ntBASIC12.71□□□□□ -0.37
Pdx1P52946 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.71□□□□□ -0.37
Pdx1P52946 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.71□□□□□ -0.37
Pdx1P52946 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.71□□□□□ -0.37
Pdx1P52946 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.71□□□□□ -0.37
Pdx1P52946 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.71□□□□□ -0.37
Pdx1P52946 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.71□□□□□ -0.37
Pdx1P52946 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.71□□□□□ -0.37
Pdx1P52946 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdx1P52946 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms