Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ClgnP52194 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.17□□□□□ -0.3
ClgnP52194 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Gm17794-201ENSMUST00000220252 955 ntBASIC13.17□□□□□ -0.3
ClgnP52194 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.17□□□□□ -0.3
ClgnP52194 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.17□□□□□ -0.3
ClgnP52194 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ClgnP52194 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.17□□□□□ -0.3
ClgnP52194 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ClgnP52194 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
ClgnP52194 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ClgnP52194 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClgnP52194 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ClgnP52194 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ClgnP52194 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ClgnP52194 Gm12928-201ENSMUST00000117115 573 ntBASIC13.16□□□□□ -0.3
ClgnP52194 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Gm12091-201ENSMUST00000146791 830 ntBASIC13.16□□□□□ -0.3
ClgnP52194 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.16□□□□□ -0.3
ClgnP52194 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.16□□□□□ -0.3
ClgnP52194 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Gm6180-201ENSMUST00000065243 498 ntBASIC13.16□□□□□ -0.3
ClgnP52194 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.16□□□□□ -0.3
ClgnP52194 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
ClgnP52194 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClgnP52194 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ClgnP52194 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.15□□□□□ -0.3
ClgnP52194 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.15□□□□□ -0.3
ClgnP52194 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.15□□□□□ -0.3
ClgnP52194 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.15□□□□□ -0.3
ClgnP52194 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.15□□□□□ -0.3
ClgnP52194 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Matn2-203ENSMUST00000226766 3252 ntBASIC13.15□□□□□ -0.3
ClgnP52194 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.15□□□□□ -0.3
ClgnP52194 Gm9002-201ENSMUST00000178437 499 ntBASIC13.15□□□□□ -0.3
ClgnP52194 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.15□□□□□ -0.3
ClgnP52194 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClgnP52194 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms