Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
RoraP51448 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.2□□□□□ -0.46
RoraP51448 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.2□□□□□ -0.46
RoraP51448 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RoraP51448 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
RoraP51448 Gm17208-201ENSMUST00000168388 535 ntBASIC12.2□□□□□ -0.46
RoraP51448 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Gm19931-201ENSMUST00000198920 368 ntBASIC12.2□□□□□ -0.46
RoraP51448 Gm18584-201ENSMUST00000203098 964 ntBASIC12.2□□□□□ -0.46
RoraP51448 Gm8227-201ENSMUST00000223306 571 ntBASIC12.2□□□□□ -0.46
RoraP51448 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
RoraP51448 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
RoraP51448 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.2□□□□□ -0.46
RoraP51448 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RoraP51448 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.2□□□□□ -0.46
RoraP51448 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.19□□□□□ -0.46
RoraP51448 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.19□□□□□ -0.46
RoraP51448 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.19□□□□□ -0.46
RoraP51448 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RoraP51448 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Gm12241-201ENSMUST00000118330 726 ntBASIC12.19□□□□□ -0.46
RoraP51448 Gm13350-201ENSMUST00000120519 479 ntBASIC12.19□□□□□ -0.46
RoraP51448 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Gm24548-201ENSMUST00000158650 108 ntBASIC12.19□□□□□ -0.46
RoraP51448 Gm7584-201ENSMUST00000175829 940 ntBASIC12.19□□□□□ -0.46
RoraP51448 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.19□□□□□ -0.46
RoraP51448 Gm43758-201ENSMUST00000199500 367 ntBASIC12.19□□□□□ -0.46
RoraP51448 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.19□□□□□ -0.46
RoraP51448 Gm32025-201ENSMUST00000217960 307 ntBASIC12.19□□□□□ -0.46
RoraP51448 Gm5781-201ENSMUST00000219792 443 ntBASIC12.19□□□□□ -0.46
RoraP51448 Gm7046-201ENSMUST00000221351 977 ntBASIC12.19□□□□□ -0.46
RoraP51448 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RoraP51448 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RoraP51448 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
RoraP51448 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RoraP51448 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
RoraP51448 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
RoraP51448 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.19□□□□□ -0.46
RoraP51448 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.19□□□□□ -0.46
RoraP51448 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RoraP51448 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.18□□□□□ -0.46
RoraP51448 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RoraP51448 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RoraP51448 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms