Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx3P50481 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Lhx3P50481 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.03□□□□□ -0.32
Lhx3P50481 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.03□□□□□ -0.32
Lhx3P50481 Gm22058-201ENSMUST00000083393 310 ntBASIC13.03□□□□□ -0.32
Lhx3P50481 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lhx3P50481 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Lhx3P50481 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.03□□□□□ -0.32
Lhx3P50481 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.03□□□□□ -0.32
Lhx3P50481 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx3P50481 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx3P50481 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx3P50481 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lhx3P50481 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lhx3P50481 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.02□□□□□ -0.32
Lhx3P50481 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx3P50481 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx3P50481 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.02□□□□□ -0.32
Lhx3P50481 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Lhx3P50481 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lhx3P50481 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Gm11964-201ENSMUST00000120982 444 ntBASIC13.02□□□□□ -0.33
Lhx3P50481 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Lhx3P50481 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.02□□□□□ -0.33
Lhx3P50481 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
Lhx3P50481 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lhx3P50481 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.02□□□□□ -0.33
Lhx3P50481 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.02□□□□□ -0.33
Lhx3P50481 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.02□□□□□ -0.33
Lhx3P50481 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lhx3P50481 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lhx3P50481 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lhx3P50481 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.01□□□□□ -0.33
Lhx3P50481 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.01□□□□□ -0.33
Lhx3P50481 Mospd4-201ENSMUST00000180618 576 ntBASIC13.01□□□□□ -0.33
Lhx3P50481 Gm27516-201ENSMUST00000184237 98 ntBASIC13.01□□□□□ -0.33
Lhx3P50481 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.01□□□□□ -0.33
Lhx3P50481 Gm5904-201ENSMUST00000210286 865 ntBASIC13.01□□□□□ -0.33
Lhx3P50481 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.01□□□□□ -0.33
Lhx3P50481 Gm7046-201ENSMUST00000221351 977 ntBASIC13.01□□□□□ -0.33
Lhx3P50481 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.01□□□□□ -0.33
Lhx3P50481 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lhx3P50481 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.01□□□□□ -0.33
Lhx3P50481 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.01□□□□□ -0.33
Lhx3P50481 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lhx3P50481 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13□□□□□ -0.33
Lhx3P50481 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lhx3P50481 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Lhx3P50481 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Lhx3P50481 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Lhx3P50481 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lhx3P50481 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms