Protein–RNA interactions for Protein: P50207

Hoxc13, Homeobox protein Hox-C13, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc13P50207 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc13P50207 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc13P50207 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc13P50207 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.99□□□□□ -0.17
Hoxc13P50207 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.98□□□□□ -0.17
Hoxc13P50207 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.98□□□□□ -0.17
Hoxc13P50207 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.98□□□□□ -0.17
Hoxc13P50207 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.98□□□□□ -0.17
Hoxc13P50207 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Gm10076-201ENSMUST00000073238 384 ntBASIC13.98□□□□□ -0.17
Hoxc13P50207 Gm24136-201ENSMUST00000083374 165 ntBASIC13.98□□□□□ -0.17
Hoxc13P50207 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.98□□□□□ -0.17
Hoxc13P50207 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hoxc13P50207 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Hoxc13P50207 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.97□□□□□ -0.17
Hoxc13P50207 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Gm14832-201ENSMUST00000121289 322 ntBASIC13.97□□□□□ -0.17
Hoxc13P50207 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.97□□□□□ -0.17
Hoxc13P50207 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Gm24845-201ENSMUST00000158034 109 ntBASIC13.97□□□□□ -0.17
Hoxc13P50207 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Gm20482-202ENSMUST00000174729 825 ntBASIC13.97□□□□□ -0.17
Hoxc13P50207 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Gm27243-201ENSMUST00000183964 521 ntBASIC13.97□□□□□ -0.17
Hoxc13P50207 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Gm9257-201ENSMUST00000221254 232 ntBASIC13.97□□□□□ -0.17
Hoxc13P50207 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.97□□□□□ -0.17
Hoxc13P50207 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.97□□□□□ -0.17
Hoxc13P50207 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.97□□□□□ -0.17
Hoxc13P50207 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Hoxc13P50207 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc13P50207 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hoxc13P50207 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc13P50207 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc13P50207 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Hoxc13P50207 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc13P50207 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.96□□□□□ -0.17
Hoxc13P50207 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Hoxc13P50207 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.96□□□□□ -0.17
Hoxc13P50207 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc13P50207 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc13P50207 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hoxc13P50207 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Hoxc13P50207 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms