Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.08□□□□□ -0.31
Vps4bP46467 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Vps4bP46467 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps4bP46467 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps4bP46467 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Vps4bP46467 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps4bP46467 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps4bP46467 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps4bP46467 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vps4bP46467 Mir686-201ENSMUST00000102174 109 ntBASIC13.08□□□□□ -0.32
Vps4bP46467 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps4bP46467 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps4bP46467 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Gm6266-201ENSMUST00000203844 806 ntBASIC13.08□□□□□ -0.32
Vps4bP46467 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.08□□□□□ -0.32
Vps4bP46467 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.08□□□□□ -0.32
Vps4bP46467 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps4bP46467 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Vps4bP46467 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps4bP46467 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vps4bP46467 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.07□□□□□ -0.32
Vps4bP46467 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vps4bP46467 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Vps4bP46467 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps4bP46467 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps4bP46467 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps4bP46467 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Vps4bP46467 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.07□□□□□ -0.32
Vps4bP46467 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.07□□□□□ -0.32
Vps4bP46467 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps4bP46467 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps4bP46467 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Vps4bP46467 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps4bP46467 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vps4bP46467 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps4bP46467 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.07□□□□□ -0.32
Vps4bP46467 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.07□□□□□ -0.32
Vps4bP46467 Gm45668-201ENSMUST00000211271 493 ntBASIC13.07□□□□□ -0.32
Vps4bP46467 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.07□□□□□ -0.32
Vps4bP46467 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps4bP46467 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps4bP46467 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.07□□□□□ -0.32
Vps4bP46467 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps4bP46467 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.07□□□□□ -0.32
Vps4bP46467 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Vps4bP46467 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps4bP46467 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.06□□□□□ -0.32
Vps4bP46467 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Vps4bP46467 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Vps4bP46467 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.06□□□□□ -0.32
Vps4bP46467 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vps4bP46467 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms