Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.18□□□□□ -0.46
Nkx2-6P43688 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.18□□□□□ -0.46
Nkx2-6P43688 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.18□□□□□ -0.46
Nkx2-6P43688 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.18□□□□□ -0.46
Nkx2-6P43688 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.18□□□□□ -0.46
Nkx2-6P43688 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Gm16570-201ENSMUST00000161951 436 ntBASIC12.17□□□□□ -0.46
Nkx2-6P43688 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.17□□□□□ -0.46
Nkx2-6P43688 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.17□□□□□ -0.46
Nkx2-6P43688 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.17□□□□□ -0.46
Nkx2-6P43688 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.17□□□□□ -0.46
Nkx2-6P43688 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-6P43688 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-6P43688 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx2-6P43688 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-6P43688 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx2-6P43688 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms