Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox18P43680 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sox18P43680 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox18P43680 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sox18P43680 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Sox18P43680 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sox18P43680 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.45□□□□□ -0.42
Sox18P43680 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.45□□□□□ -0.42
Sox18P43680 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sox18P43680 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Gm13611-201ENSMUST00000118269 318 ntBASIC12.45□□□□□ -0.42
Sox18P43680 Gm12208-201ENSMUST00000122004 163 ntBASIC12.45□□□□□ -0.42
Sox18P43680 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sox18P43680 Gm23757-201ENSMUST00000158353 100 ntBASIC12.45□□□□□ -0.42
Sox18P43680 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.45□□□□□ -0.42
Sox18P43680 Gm9211-201ENSMUST00000182882 975 ntBASIC12.45□□□□□ -0.42
Sox18P43680 Gm8885-201ENSMUST00000189382 598 ntBASIC12.45□□□□□ -0.42
Sox18P43680 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Gm5950-201ENSMUST00000213337 772 ntBASIC12.45□□□□□ -0.42
Sox18P43680 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.45□□□□□ -0.42
Sox18P43680 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC12.45□□□□□ -0.42
Sox18P43680 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC12.45□□□□□ -0.42
Sox18P43680 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sox18P43680 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sox18P43680 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sox18P43680 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sox18P43680 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox18P43680 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sox18P43680 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Gm14109-201ENSMUST00000118814 309 ntBASIC12.44□□□□□ -0.42
Sox18P43680 Gm15547-201ENSMUST00000122152 333 ntBASIC12.44□□□□□ -0.42
Sox18P43680 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.44□□□□□ -0.42
Sox18P43680 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Gm44146-201ENSMUST00000203508 816 ntBASIC12.44□□□□□ -0.42
Sox18P43680 Gm44607-201ENSMUST00000205611 1090 ntBASIC12.44□□□□□ -0.42
Sox18P43680 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.44□□□□□ -0.42
Sox18P43680 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.44□□□□□ -0.42
Sox18P43680 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.44□□□□□ -0.42
Sox18P43680 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Sox18P43680 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.44□□□□□ -0.42
Sox18P43680 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.44□□□□□ -0.42
Sox18P43680 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox18P43680 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Sox18P43680 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Sox18P43680 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Snord83b-201ENSMUST00000104546 94 ntBASIC12.43□□□□□ -0.42
Sox18P43680 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
Sox18P43680 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox18P43680 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms