Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hist1h1aP43275 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Hist1h1aP43275 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hist1h1aP43275 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Hist1h1aP43275 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.65□□□□□ -0.71
Hist1h1aP43275 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hist1h1aP43275 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Hist1h1aP43275 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.65□□□□□ -0.71
Hist1h1aP43275 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Hist1h1aP43275 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm11524-201ENSMUST00000119349 807 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm21854-201ENSMUST00000179901 471 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm27838-201ENSMUST00000184829 128 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm29608-201ENSMUST00000190444 463 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm5279-201ENSMUST00000199575 745 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm9797-201ENSMUST00000052902 613 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.64□□□□□ -0.71
Hist1h1aP43275 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Hist1h1aP43275 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Gm15487-201ENSMUST00000122373 465 ntBASIC10.63□□□□□ -0.71
Hist1h1aP43275 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Gm19078-201ENSMUST00000206311 727 ntBASIC10.63□□□□□ -0.71
Hist1h1aP43275 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Hist1h1aP43275 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms