Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh2P43247 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh2P43247 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh2P43247 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh2P43247 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Msh2P43247 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.28□□□□□ -0.28
Msh2P43247 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.28□□□□□ -0.28
Msh2P43247 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Msh2P43247 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh2P43247 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh2P43247 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Msh2P43247 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.27□□□□□ -0.28
Msh2P43247 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh2P43247 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh2P43247 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh2P43247 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.27□□□□□ -0.28
Msh2P43247 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Msh2P43247 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Msh2P43247 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.27□□□□□ -0.29
Msh2P43247 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.27□□□□□ -0.29
Msh2P43247 Gm11918-201ENSMUST00000121660 179 ntBASIC13.27□□□□□ -0.29
Msh2P43247 Gm12138-201ENSMUST00000122180 951 ntBASIC13.27□□□□□ -0.29
Msh2P43247 Gm15429-201ENSMUST00000151268 798 ntBASIC13.27□□□□□ -0.29
Msh2P43247 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Gm28911-201ENSMUST00000188837 117 ntBASIC13.27□□□□□ -0.29
Msh2P43247 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Msh2P43247 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.27□□□□□ -0.29
Msh2P43247 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.27□□□□□ -0.29
Msh2P43247 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Msh2P43247 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Msh2P43247 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.27□□□□□ -0.29
Msh2P43247 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.27□□□□□ -0.29
Msh2P43247 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Msh2P43247 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.27□□□□□ -0.29
Msh2P43247 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Msh2P43247 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Msh2P43247 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Msh2P43247 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Msh2P43247 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Msh2P43247 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Msh2P43247 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Gm15371-201ENSMUST00000117057 784 ntBASIC13.26□□□□□ -0.29
Msh2P43247 Gm11424-201ENSMUST00000121929 829 ntBASIC13.26□□□□□ -0.29
Msh2P43247 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.26□□□□□ -0.29
Msh2P43247 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.26□□□□□ -0.29
Msh2P43247 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Msh2P43247 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Msh2P43247 Gm29608-201ENSMUST00000190444 463 ntBASIC13.26□□□□□ -0.29
Msh2P43247 Gm38144-201ENSMUST00000192790 465 ntBASIC13.26□□□□□ -0.29
Msh2P43247 Gm44124-201ENSMUST00000204159 472 ntBASIC13.26□□□□□ -0.29
Msh2P43247 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.26□□□□□ -0.29
Msh2P43247 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Msh2P43247 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Msh2P43247 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Msh2P43247 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Msh2P43247 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Msh2P43247 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Msh2P43247 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms