Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.28□□□□□ -0.28
HttP42859 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Gm45575-201ENSMUST00000210283 548 ntBASIC13.28□□□□□ -0.28
HttP42859 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HttP42859 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.28□□□□□ -0.28
HttP42859 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HttP42859 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.28□□□□□ -0.28
HttP42859 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HttP42859 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.28□□□□□ -0.28
HttP42859 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.28□□□□□ -0.28
HttP42859 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.28□□□□□ -0.28
HttP42859 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.28□□□□□ -0.28
HttP42859 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.28□□□□□ -0.28
HttP42859 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HttP42859 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Gm11663-201ENSMUST00000117888 290 ntBASIC13.28□□□□□ -0.28
HttP42859 Gm12453-201ENSMUST00000121981 331 ntBASIC13.28□□□□□ -0.28
HttP42859 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC13.28□□□□□ -0.28
HttP42859 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.28□□□□□ -0.28
HttP42859 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.28□□□□□ -0.28
HttP42859 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.28□□□□□ -0.28
HttP42859 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.28□□□□□ -0.28
HttP42859 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.28□□□□□ -0.28
HttP42859 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HttP42859 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.27□□□□□ -0.28
HttP42859 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HttP42859 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HttP42859 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HttP42859 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HttP42859 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.27□□□□□ -0.28
HttP42859 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HttP42859 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HttP42859 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
HttP42859 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HttP42859 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HttP42859 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HttP42859 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HttP42859 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HttP42859 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HttP42859 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HttP42859 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HttP42859 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.27□□□□□ -0.29
HttP42859 Gm17070-201ENSMUST00000170463 784 ntBASIC13.27□□□□□ -0.29
HttP42859 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC13.27□□□□□ -0.29
HttP42859 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.27□□□□□ -0.29
HttP42859 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HttP42859 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HttP42859 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HttP42859 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HttP42859 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.26□□□□□ -0.29
HttP42859 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HttP42859 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HttP42859 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.26□□□□□ -0.29
HttP42859 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
HttP42859 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HttP42859 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.26□□□□□ -0.29
HttP42859 Gm7238-201ENSMUST00000206467 973 ntBASIC13.26□□□□□ -0.29
HttP42859 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.26□□□□□ -0.29
HttP42859 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.26□□□□□ -0.29
HttP42859 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.26□□□□□ -0.29
HttP42859 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
HttP42859 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
HttP42859 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HttP42859 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HttP42859 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HttP42859 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms