Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.8□□□□□ -0.52
Nkx2-2P42586 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx2-2P42586 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx2-2P42586 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.79□□□□□ -0.52
Nkx2-2P42586 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.79□□□□□ -0.52
Nkx2-2P42586 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gm40466-201ENSMUST00000212174 422 ntBASIC11.79□□□□□ -0.52
Nkx2-2P42586 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.79□□□□□ -0.52
Nkx2-2P42586 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.79□□□□□ -0.52
Nkx2-2P42586 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx2-2P42586 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx2-2P42586 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.78□□□□□ -0.52
Nkx2-2P42586 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.78□□□□□ -0.52
Nkx2-2P42586 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.78□□□□□ -0.52
Nkx2-2P42586 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx2-2P42586 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms