Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox6P40645 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.11□□□□□ -0.47
Sox6P40645 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.11□□□□□ -0.47
Sox6P40645 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sox6P40645 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Gm15376-201ENSMUST00000122258 783 ntBASIC12.11□□□□□ -0.47
Sox6P40645 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox6P40645 Gm45668-201ENSMUST00000211271 493 ntBASIC12.11□□□□□ -0.47
Sox6P40645 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox6P40645 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox6P40645 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.11□□□□□ -0.47
Sox6P40645 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.11□□□□□ -0.47
Sox6P40645 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sox6P40645 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.11□□□□□ -0.47
Sox6P40645 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.11□□□□□ -0.47
Sox6P40645 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox6P40645 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.11□□□□□ -0.47
Sox6P40645 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox6P40645 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Sox6P40645 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sox6P40645 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Gm15371-201ENSMUST00000117057 784 ntBASIC12.1□□□□□ -0.47
Sox6P40645 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.1□□□□□ -0.47
Sox6P40645 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox6P40645 Gm12091-201ENSMUST00000146791 830 ntBASIC12.1□□□□□ -0.47
Sox6P40645 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.1□□□□□ -0.47
Sox6P40645 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.1□□□□□ -0.47
Sox6P40645 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox6P40645 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox6P40645 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox6P40645 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sox6P40645 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.1□□□□□ -0.47
Sox6P40645 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sox6P40645 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sox6P40645 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox6P40645 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sox6P40645 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox6P40645 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sox6P40645 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Sox6P40645 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox6P40645 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms