Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LdlrP35951 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.83□□□□□ -0.36
LdlrP35951 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LdlrP35951 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LdlrP35951 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.83□□□□□ -0.36
LdlrP35951 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
LdlrP35951 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LdlrP35951 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LdlrP35951 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.82□□□□□ -0.36
LdlrP35951 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
LdlrP35951 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
LdlrP35951 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.82□□□□□ -0.36
LdlrP35951 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LdlrP35951 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.82□□□□□ -0.36
LdlrP35951 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.82□□□□□ -0.36
LdlrP35951 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
LdlrP35951 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.82□□□□□ -0.36
LdlrP35951 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.82□□□□□ -0.36
LdlrP35951 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.82□□□□□ -0.36
LdlrP35951 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.82□□□□□ -0.36
LdlrP35951 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.82□□□□□ -0.36
LdlrP35951 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LdlrP35951 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.82□□□□□ -0.36
LdlrP35951 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LdlrP35951 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LdlrP35951 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LdlrP35951 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
LdlrP35951 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.81□□□□□ -0.36
LdlrP35951 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.81□□□□□ -0.36
LdlrP35951 Gm13392-201ENSMUST00000117708 150 ntBASIC12.81□□□□□ -0.36
LdlrP35951 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.81□□□□□ -0.36
LdlrP35951 Gm6447-201ENSMUST00000118905 835 ntBASIC12.81□□□□□ -0.36
LdlrP35951 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Snora78-201ENSMUST00000158630 128 ntBASIC12.81□□□□□ -0.36
LdlrP35951 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LdlrP35951 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Gm27839-201ENSMUST00000184242 106 ntBASIC12.81□□□□□ -0.36
LdlrP35951 Gm19078-201ENSMUST00000206311 727 ntBASIC12.81□□□□□ -0.36
LdlrP35951 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.81□□□□□ -0.36
LdlrP35951 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.81□□□□□ -0.36
LdlrP35951 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.81□□□□□ -0.36
LdlrP35951 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LdlrP35951 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LdlrP35951 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms