Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Mmp13P33435 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.19□□□□□ -0.3
Mmp13P33435 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Mmp13P33435 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Mmp13P33435 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Mmp13P33435 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Mmp13P33435 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Mmp13P33435 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.18□□□□□ -0.3
Mmp13P33435 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.18□□□□□ -0.3
Mmp13P33435 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.18□□□□□ -0.3
Mmp13P33435 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.18□□□□□ -0.3
Mmp13P33435 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.18□□□□□ -0.3
Mmp13P33435 Gm17794-201ENSMUST00000220252 955 ntBASIC13.18□□□□□ -0.3
Mmp13P33435 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.18□□□□□ -0.3
Mmp13P33435 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Mmp13P33435 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp13P33435 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.17□□□□□ -0.3
Mmp13P33435 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Mmp13P33435 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.17□□□□□ -0.3
Mmp13P33435 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.17□□□□□ -0.3
Mmp13P33435 Mir1894-201ENSMUST00000122802 81 ntBASIC13.17□□□□□ -0.3
Mmp13P33435 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Mmp13P33435 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.17□□□□□ -0.3
Mmp13P33435 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.17□□□□□ -0.3
Mmp13P33435 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Gm2495-201ENSMUST00000191160 466 ntBASIC13.17□□□□□ -0.3
Mmp13P33435 Gm44397-201ENSMUST00000195950 113 ntBASIC13.17□□□□□ -0.3
Mmp13P33435 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.17□□□□□ -0.3
Mmp13P33435 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Mmp13P33435 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.17□□□□□ -0.3
Mmp13P33435 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Mmp13P33435 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Mmp13P33435 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp13P33435 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Mmp13P33435 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.16□□□□□ -0.3
Mmp13P33435 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp13P33435 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms