Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CenpbP27790 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CenpbP27790 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CenpbP27790 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.33■□□□□ 0.37
CenpbP27790 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CenpbP27790 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CenpbP27790 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.33■□□□□ 0.37
CenpbP27790 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CenpbP27790 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CenpbP27790 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CenpbP27790 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CenpbP27790 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CenpbP27790 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CenpbP27790 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CenpbP27790 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CenpbP27790 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CenpbP27790 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.33■□□□□ 0.36
CenpbP27790 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CenpbP27790 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.33■□□□□ 0.36
CenpbP27790 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.33■□□□□ 0.36
CenpbP27790 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CenpbP27790 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
CenpbP27790 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CenpbP27790 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CenpbP27790 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CenpbP27790 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CenpbP27790 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CenpbP27790 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CenpbP27790 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CenpbP27790 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CenpbP27790 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CenpbP27790 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CenpbP27790 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.32■□□□□ 0.36
CenpbP27790 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Gm5989-201ENSMUST00000096092 2077 ntBASIC17.32■□□□□ 0.36
CenpbP27790 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.32■□□□□ 0.36
CenpbP27790 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.32■□□□□ 0.36
CenpbP27790 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CenpbP27790 Gm6124-201ENSMUST00000188240 2580 ntBASIC17.32■□□□□ 0.36
CenpbP27790 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC17.31■□□□□ 0.36
CenpbP27790 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 AC159195.3-201ENSMUST00000225162 2211 ntBASIC17.31■□□□□ 0.36
CenpbP27790 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.31■□□□□ 0.36
CenpbP27790 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CenpbP27790 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
CenpbP27790 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CenpbP27790 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CenpbP27790 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.31■□□□□ 0.36
CenpbP27790 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CenpbP27790 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CenpbP27790 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CenpbP27790 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CenpbP27790 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CenpbP27790 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CenpbP27790 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CenpbP27790 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CenpbP27790 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CenpbP27790 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CenpbP27790 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CenpbP27790 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CenpbP27790 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CenpbP27790 Gm16026-204ENSMUST00000162652 683 ntBASIC17.3■□□□□ 0.36
CenpbP27790 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms