Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.08□□□□□ -0.16
Pde6bP23440 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pde6bP23440 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.08□□□□□ -0.16
Pde6bP23440 Morn2-202ENSMUST00000227729 656 ntBASIC14.08□□□□□ -0.16
Pde6bP23440 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pde6bP23440 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.08□□□□□ -0.16
Pde6bP23440 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pde6bP23440 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pde6bP23440 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.08□□□□□ -0.16
Pde6bP23440 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Pde6bP23440 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Pde6bP23440 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.08□□□□□ -0.16
Pde6bP23440 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pde6bP23440 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.07□□□□□ -0.16
Pde6bP23440 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.07□□□□□ -0.16
Pde6bP23440 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Gm11978-201ENSMUST00000122315 466 ntBASIC14.07□□□□□ -0.16
Pde6bP23440 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.07□□□□□ -0.16
Pde6bP23440 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.07□□□□□ -0.16
Pde6bP23440 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pde6bP23440 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.07□□□□□ -0.16
Pde6bP23440 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.07□□□□□ -0.16
Pde6bP23440 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pde6bP23440 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pde6bP23440 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.07□□□□□ -0.16
Pde6bP23440 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Pde6bP23440 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Pde6bP23440 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pde6bP23440 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.06□□□□□ -0.16
Pde6bP23440 Gm11222-201ENSMUST00000119005 738 ntBASIC14.06□□□□□ -0.16
Pde6bP23440 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.06□□□□□ -0.16
Pde6bP23440 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Gm8738-201ENSMUST00000172606 329 ntBASIC14.06□□□□□ -0.16
Pde6bP23440 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.06□□□□□ -0.16
Pde6bP23440 Gm37466-201ENSMUST00000195692 652 ntBASIC14.06□□□□□ -0.16
Pde6bP23440 Gm6082-201ENSMUST00000215204 454 ntBASIC14.06□□□□□ -0.16
Pde6bP23440 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.06□□□□□ -0.16
Pde6bP23440 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pde6bP23440 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.06□□□□□ -0.16
Pde6bP23440 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pde6bP23440 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms