Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdx1P18111 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cdx1P18111 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdx1P18111 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cdx1P18111 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.43□□□□□ -0.74
Cdx1P18111 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.43□□□□□ -0.74
Cdx1P18111 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.43□□□□□ -0.74
Cdx1P18111 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Gm12859-201ENSMUST00000117834 427 ntBASIC10.43□□□□□ -0.74
Cdx1P18111 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.43□□□□□ -0.74
Cdx1P18111 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.43□□□□□ -0.74
Cdx1P18111 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Cdx1P18111 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdx1P18111 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx1P18111 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cdx1P18111 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.42□□□□□ -0.74
Cdx1P18111 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx1P18111 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.42□□□□□ -0.74
Cdx1P18111 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx1P18111 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx1P18111 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.42□□□□□ -0.74
Cdx1P18111 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx1P18111 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdx1P18111 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx1P18111 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdx1P18111 Gm29667-201ENSMUST00000190817 490 ntBASIC10.42□□□□□ -0.74
Cdx1P18111 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx1P18111 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx1P18111 Dupd1-202ENSMUST00000224735 548 ntBASIC10.42□□□□□ -0.74
Cdx1P18111 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx1P18111 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdx1P18111 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms