Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.34□□□□□ -0.43
Msx1P13297 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Msx1P13297 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC12.34□□□□□ -0.43
Msx1P13297 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.34□□□□□ -0.43
Msx1P13297 Gm29396-201ENSMUST00000185659 716 ntBASIC12.34□□□□□ -0.43
Msx1P13297 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.34□□□□□ -0.43
Msx1P13297 Gm44607-201ENSMUST00000205611 1090 ntBASIC12.34□□□□□ -0.43
Msx1P13297 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Msx1P13297 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Msx1P13297 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.34□□□□□ -0.43
Msx1P13297 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Msx1P13297 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx1P13297 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.34□□□□□ -0.43
Msx1P13297 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.34□□□□□ -0.43
Msx1P13297 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC12.34□□□□□ -0.43
Msx1P13297 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Msx1P13297 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Msx1P13297 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Msx1P13297 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Msx1P13297 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.33□□□□□ -0.44
Msx1P13297 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Msx1P13297 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Msx1P13297 Mir686-201ENSMUST00000102174 109 ntBASIC12.33□□□□□ -0.44
Msx1P13297 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.33□□□□□ -0.44
Msx1P13297 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.33□□□□□ -0.44
Msx1P13297 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Msx1P13297 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Msx1P13297 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Msx1P13297 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Msx1P13297 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.33□□□□□ -0.44
Msx1P13297 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.33□□□□□ -0.44
Msx1P13297 Gm42516-201ENSMUST00000198691 767 ntBASIC12.33□□□□□ -0.44
Msx1P13297 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.33□□□□□ -0.44
Msx1P13297 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.33□□□□□ -0.44
Msx1P13297 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.33□□□□□ -0.44
Msx1P13297 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.33□□□□□ -0.44
Msx1P13297 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Msx1P13297 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 AC136019.1-201ENSMUST00000226503 1412 ntBASIC12.33□□□□□ -0.44
Msx1P13297 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Msx1P13297 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Msx1P13297 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
Msx1P13297 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx1P13297 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms