Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.07□□□□□ -0.48
Nid1P10493 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nid1P10493 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Nid1P10493 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nid1P10493 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nid1P10493 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.07□□□□□ -0.48
Nid1P10493 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.06□□□□□ -0.48
Nid1P10493 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Nid1P10493 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nid1P10493 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Nid1P10493 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.06□□□□□ -0.48
Nid1P10493 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nid1P10493 Gm11918-201ENSMUST00000121660 179 ntBASIC12.06□□□□□ -0.48
Nid1P10493 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.06□□□□□ -0.48
Nid1P10493 Gm8810-201ENSMUST00000172895 754 ntBASIC12.06□□□□□ -0.48
Nid1P10493 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.06□□□□□ -0.48
Nid1P10493 Gm37497-201ENSMUST00000195830 798 ntBASIC12.06□□□□□ -0.48
Nid1P10493 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.06□□□□□ -0.48
Nid1P10493 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.06□□□□□ -0.48
Nid1P10493 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.06□□□□□ -0.48
Nid1P10493 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.06□□□□□ -0.48
Nid1P10493 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nid1P10493 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.05□□□□□ -0.48
Nid1P10493 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Nid1P10493 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nid1P10493 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nid1P10493 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nid1P10493 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.05□□□□□ -0.48
Nid1P10493 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.05□□□□□ -0.48
Nid1P10493 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.05□□□□□ -0.48
Nid1P10493 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nid1P10493 Gm14704-201ENSMUST00000120300 874 ntBASIC12.05□□□□□ -0.48
Nid1P10493 Gm16479-201ENSMUST00000121706 932 ntBASIC12.05□□□□□ -0.48
Nid1P10493 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Gm22121-201ENSMUST00000175148 54 ntBASIC12.05□□□□□ -0.48
Nid1P10493 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.05□□□□□ -0.48
Nid1P10493 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.05□□□□□ -0.48
Nid1P10493 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.05□□□□□ -0.48
Nid1P10493 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nid1P10493 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.05□□□□□ -0.48
Nid1P10493 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nid1P10493 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.05□□□□□ -0.48
Nid1P10493 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.05□□□□□ -0.48
Nid1P10493 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nid1P10493 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms