Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
UbbP0CG49 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.22□□□□□ -0.61
UbbP0CG49 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UbbP0CG49 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.22□□□□□ -0.61
UbbP0CG49 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.22□□□□□ -0.61
UbbP0CG49 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
UbbP0CG49 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
UbbP0CG49 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.22□□□□□ -0.61
UbbP0CG49 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.22□□□□□ -0.61
UbbP0CG49 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.22□□□□□ -0.61
UbbP0CG49 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
UbbP0CG49 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
UbbP0CG49 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
UbbP0CG49 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
UbbP0CG49 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
UbbP0CG49 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.22□□□□□ -0.61
UbbP0CG49 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
UbbP0CG49 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.21□□□□□ -0.61
UbbP0CG49 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
UbbP0CG49 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
UbbP0CG49 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
UbbP0CG49 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.21□□□□□ -0.61
UbbP0CG49 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.21□□□□□ -0.61
UbbP0CG49 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.21□□□□□ -0.61
UbbP0CG49 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.21□□□□□ -0.61
UbbP0CG49 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.21□□□□□ -0.61
UbbP0CG49 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.21□□□□□ -0.61
UbbP0CG49 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Gm9522-201ENSMUST00000182394 926 ntBASIC11.21□□□□□ -0.61
UbbP0CG49 Gm42550-201ENSMUST00000201553 960 ntBASIC11.21□□□□□ -0.61
UbbP0CG49 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.21□□□□□ -0.61
UbbP0CG49 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.21□□□□□ -0.61
UbbP0CG49 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
UbbP0CG49 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
UbbP0CG49 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
UbbP0CG49 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.21□□□□□ -0.62
UbbP0CG49 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.21□□□□□ -0.62
UbbP0CG49 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
UbbP0CG49 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
UbbP0CG49 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.2□□□□□ -0.62
UbbP0CG49 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.2□□□□□ -0.62
UbbP0CG49 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
UbbP0CG49 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
UbbP0CG49 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.2□□□□□ -0.62
UbbP0CG49 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.2□□□□□ -0.62
UbbP0CG49 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
UbbP0CG49 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
UbbP0CG49 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UbbP0CG49 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms