Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC8.81□□□□□ -1
Smim1P0C8K7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Smim1P0C8K7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Smim1P0C8K7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Smim1P0C8K7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC8.81□□□□□ -1
Smim1P0C8K7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Smim1P0C8K7 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Smim1P0C8K7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.81□□□□□ -1
Smim1P0C8K7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Smim1P0C8K7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Smim1P0C8K7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Smim1P0C8K7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Smim1P0C8K7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC8.8□□□□□ -1
Smim1P0C8K7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Smim1P0C8K7 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC8.8□□□□□ -1
Smim1P0C8K7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC8.8□□□□□ -1
Smim1P0C8K7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Gm11543-201ENSMUST00000120758 370 ntBASIC8.8□□□□□ -1
Smim1P0C8K7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC8.8□□□□□ -1
Smim1P0C8K7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Mir7036b-201ENSMUST00000184791 63 ntBASIC8.8□□□□□ -1
Smim1P0C8K7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC8.8□□□□□ -1
Smim1P0C8K7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC8.8□□□□□ -1
Smim1P0C8K7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC8.8□□□□□ -1
Smim1P0C8K7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Smim1P0C8K7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Birc2-201ENSMUST00000054878 378 ntBASIC8.8□□□□□ -1
Smim1P0C8K7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Smim1P0C8K7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC8.8□□□□□ -1
Smim1P0C8K7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC8.8□□□□□ -1
Smim1P0C8K7 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
Smim1P0C8K7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC8.8□□□□□ -1
Smim1P0C8K7 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Smim1P0C8K7 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Gm43522-201ENSMUST00000196697 1922 ntBASIC8.8□□□□□ -1
Smim1P0C8K7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Smim1P0C8K7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Gm6211-201ENSMUST00000147973 4275 ntBASIC8.8□□□□□ -1
Smim1P0C8K7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Smim1P0C8K7 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC8.79□□□□□ -1
Smim1P0C8K7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms