Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm24514-201ENSMUST00000174961 285 ntBASIC16.57■□□□□ 0.24
Hoxc9P09633 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Hoxc9P09633 Gm43378-201ENSMUST00000199336 582 ntBASIC16.57■□□□□ 0.24
Hoxc9P09633 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.57■□□□□ 0.24
Hoxc9P09633 Gm8959-201ENSMUST00000213150 571 ntBASIC16.57■□□□□ 0.24
Hoxc9P09633 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Hoxc9P09633 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.57■□□□□ 0.24
Hoxc9P09633 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Hoxc9P09633 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm12380-201ENSMUST00000119012 544 ntBASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.56■□□□□ 0.24
Hoxc9P09633 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm44100-201ENSMUST00000204329 436 ntBASIC16.56■□□□□ 0.24
Hoxc9P09633 AC159205.5-202ENSMUST00000224849 386 ntBASIC16.56■□□□□ 0.24
Hoxc9P09633 AC163667.3-201ENSMUST00000225774 222 ntBASIC16.56■□□□□ 0.24
Hoxc9P09633 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.56■□□□□ 0.24
Hoxc9P09633 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc9P09633 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.55■□□□□ 0.24
Hoxc9P09633 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.55■□□□□ 0.24
Hoxc9P09633 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.55■□□□□ 0.24
Hoxc9P09633 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.55■□□□□ 0.24
Hoxc9P09633 Rmrp-201ENSMUST00000157463 271 ntBASIC16.55■□□□□ 0.24
Hoxc9P09633 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC16.55■□□□□ 0.24
Hoxc9P09633 AU022133-201ENSMUST00000200601 873 ntBASIC16.55■□□□□ 0.24
Hoxc9P09633 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.55■□□□□ 0.24
Hoxc9P09633 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.55■□□□□ 0.24
Hoxc9P09633 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hoxc9P09633 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hoxc9P09633 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hoxc9P09633 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.55■□□□□ 0.24
Hoxc9P09633 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.55■□□□□ 0.24
Hoxc9P09633 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc9P09633 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.55■□□□□ 0.24
Hoxc9P09633 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Hoxc9P09633 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc9P09633 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc9P09633 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc9P09633 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hoxc9P09633 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc9P09633 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc9P09633 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc9P09633 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc9P09633 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc9P09633 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc9P09633 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.54■□□□□ 0.24
Hoxc9P09633 Gm12266-201ENSMUST00000120311 962 ntBASIC16.54■□□□□ 0.24
Hoxc9P09633 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc9P09633 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms