Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LtaP09225 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.55□□□□□ -0.72
LtaP09225 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.55□□□□□ -0.72
LtaP09225 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LtaP09225 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.54□□□□□ -0.72
LtaP09225 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LtaP09225 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.54□□□□□ -0.72
LtaP09225 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LtaP09225 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.54□□□□□ -0.72
LtaP09225 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
LtaP09225 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LtaP09225 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
LtaP09225 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.54□□□□□ -0.72
LtaP09225 Gm17208-201ENSMUST00000168388 535 ntBASIC10.54□□□□□ -0.72
LtaP09225 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.54□□□□□ -0.72
LtaP09225 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Gm37424-201ENSMUST00000191727 561 ntBASIC10.54□□□□□ -0.72
LtaP09225 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.54□□□□□ -0.72
LtaP09225 Gm37042-201ENSMUST00000193816 581 ntBASIC10.54□□□□□ -0.72
LtaP09225 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.54□□□□□ -0.72
LtaP09225 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.54□□□□□ -0.72
LtaP09225 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
LtaP09225 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LtaP09225 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
LtaP09225 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LtaP09225 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.53□□□□□ -0.72
LtaP09225 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.53□□□□□ -0.72
LtaP09225 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.53□□□□□ -0.72
LtaP09225 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.53□□□□□ -0.72
LtaP09225 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.53□□□□□ -0.72
LtaP09225 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.53□□□□□ -0.72
LtaP09225 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.53□□□□□ -0.72
LtaP09225 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.53□□□□□ -0.72
LtaP09225 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LtaP09225 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.53□□□□□ -0.72
LtaP09225 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.53□□□□□ -0.72
LtaP09225 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.53□□□□□ -0.72
LtaP09225 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.53□□□□□ -0.72
LtaP09225 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.53□□□□□ -0.72
LtaP09225 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.53□□□□□ -0.72
LtaP09225 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.53□□□□□ -0.72
LtaP09225 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
LtaP09225 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LtaP09225 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms