Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc8P09025 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc8P09025 Gm9996-201ENSMUST00000070359 913 ntBASIC13.61□□□□□ -0.23
Hoxc8P09025 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxc8P09025 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hoxc8P09025 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Hoxc8P09025 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc8P09025 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc8P09025 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxc8P09025 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.61□□□□□ -0.23
Hoxc8P09025 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc8P09025 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc8P09025 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Hoxc8P09025 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc8P09025 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hoxc8P09025 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc8P09025 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hoxc8P09025 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.6□□□□□ -0.23
Hoxc8P09025 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hoxc8P09025 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Gm23949-201ENSMUST00000104027 127 ntBASIC13.6□□□□□ -0.23
Hoxc8P09025 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.6□□□□□ -0.23
Hoxc8P09025 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.6□□□□□ -0.23
Hoxc8P09025 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hoxc8P09025 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.6□□□□□ -0.23
Hoxc8P09025 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.6□□□□□ -0.23
Hoxc8P09025 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Gm22334-201ENSMUST00000158070 133 ntBASIC13.6□□□□□ -0.23
Hoxc8P09025 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.6□□□□□ -0.23
Hoxc8P09025 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.6□□□□□ -0.23
Hoxc8P09025 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.6□□□□□ -0.23
Hoxc8P09025 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.6□□□□□ -0.23
Hoxc8P09025 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hoxc8P09025 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hoxc8P09025 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hoxc8P09025 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hoxc8P09025 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.59□□□□□ -0.23
Hoxc8P09025 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.59□□□□□ -0.23
Hoxc8P09025 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm29615-201ENSMUST00000185371 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm28224-201ENSMUST00000186078 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm29001-201ENSMUST00000186177 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm28292-201ENSMUST00000186593 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm28101-201ENSMUST00000187608 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm29076-201ENSMUST00000187689 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm28302-201ENSMUST00000187931 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm28646-201ENSMUST00000188220 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm28205-201ENSMUST00000189177 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm29032-201ENSMUST00000189797 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm28695-201ENSMUST00000190300 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm37448-201ENSMUST00000192795 697 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm44100-201ENSMUST00000204329 436 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.59□□□□□ -0.23
Hoxc8P09025 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hoxc8P09025 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms