Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TnfP06804 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.65□□□□□ -0.22
TnfP06804 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.65□□□□□ -0.22
TnfP06804 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.65□□□□□ -0.22
TnfP06804 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.65□□□□□ -0.22
TnfP06804 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TnfP06804 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TnfP06804 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.65□□□□□ -0.22
TnfP06804 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
TnfP06804 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TnfP06804 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TnfP06804 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TnfP06804 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TnfP06804 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TnfP06804 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Gm26956-201ENSMUST00000182176 986 ntBASIC13.64□□□□□ -0.23
TnfP06804 Gm2546-201ENSMUST00000182630 991 ntBASIC13.64□□□□□ -0.23
TnfP06804 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.64□□□□□ -0.23
TnfP06804 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.64□□□□□ -0.23
TnfP06804 Gm44405-201ENSMUST00000198952 126 ntBASIC13.64□□□□□ -0.23
TnfP06804 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TnfP06804 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.64□□□□□ -0.23
TnfP06804 Gm30285-201ENSMUST00000214614 422 ntBASIC13.64□□□□□ -0.23
TnfP06804 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.64□□□□□ -0.23
TnfP06804 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.64□□□□□ -0.23
TnfP06804 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.64□□□□□ -0.23
TnfP06804 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.64□□□□□ -0.23
TnfP06804 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TnfP06804 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TnfP06804 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.63□□□□□ -0.23
TnfP06804 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TnfP06804 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TnfP06804 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TnfP06804 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.63□□□□□ -0.23
TnfP06804 Gm38241-201ENSMUST00000192641 898 ntBASIC13.63□□□□□ -0.23
TnfP06804 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.63□□□□□ -0.23
TnfP06804 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.63□□□□□ -0.23
TnfP06804 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.63□□□□□ -0.23
TnfP06804 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TnfP06804 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.63□□□□□ -0.23
TnfP06804 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TnfP06804 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TnfP06804 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
TnfP06804 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TnfP06804 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms