Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04213 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04213 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04213 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
P04213 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.33□□□□□ -0.44
P04213 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.33□□□□□ -0.44
P04213 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.33□□□□□ -0.44
P04213 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
P04213 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Gm8213-201ENSMUST00000118191 441 ntBASIC12.33□□□□□ -0.44
P04213 Gm12203-201ENSMUST00000118235 598 ntBASIC12.33□□□□□ -0.44
P04213 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.33□□□□□ -0.44
P04213 Gm12209-201ENSMUST00000120089 596 ntBASIC12.33□□□□□ -0.44
P04213 Gm14704-201ENSMUST00000120300 874 ntBASIC12.33□□□□□ -0.44
P04213 Gm16479-201ENSMUST00000121706 932 ntBASIC12.33□□□□□ -0.44
P04213 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Gm8652-201ENSMUST00000181363 964 ntBASIC12.33□□□□□ -0.44
P04213 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.33□□□□□ -0.44
P04213 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
P04213 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.33□□□□□ -0.44
P04213 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.33□□□□□ -0.44
P04213 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.33□□□□□ -0.44
P04213 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
P04213 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Mir339-201ENSMUST00000083659 96 ntBASIC12.33□□□□□ -0.44
P04213 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.33□□□□□ -0.44
P04213 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.33□□□□□ -0.44
P04213 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.33□□□□□ -0.44
P04213 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.33□□□□□ -0.44
P04213 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.33□□□□□ -0.44
P04213 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
P04213 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04213 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
P04213 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.32□□□□□ -0.44
P04213 Gm37922-201ENSMUST00000195596 455 ntBASIC12.32□□□□□ -0.44
P04213 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.32□□□□□ -0.44
P04213 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P04213 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.31□□□□□ -0.44
P04213 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.31□□□□□ -0.44
P04213 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P04213 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.31□□□□□ -0.44
P04213 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04213 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.31□□□□□ -0.44
P04213 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms