Protein–RNA interactions for Protein: O88574

Sap30, Histone deacetylase complex subunit SAP30, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sap30O88574 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.08□□□□□ -0.8
Sap30O88574 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Sap30O88574 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.08□□□□□ -0.8
Sap30O88574 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sap30O88574 Gm43818-201ENSMUST00000200605 466 ntBASIC10.08□□□□□ -0.8
Sap30O88574 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.08□□□□□ -0.8
Sap30O88574 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.08□□□□□ -0.8
Sap30O88574 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sap30O88574 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.08□□□□□ -0.8
Sap30O88574 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.08□□□□□ -0.8
Sap30O88574 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sap30O88574 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sap30O88574 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.07□□□□□ -0.8
Sap30O88574 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sap30O88574 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sap30O88574 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sap30O88574 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sap30O88574 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.07□□□□□ -0.8
Sap30O88574 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Gm8213-201ENSMUST00000118191 441 ntBASIC10.07□□□□□ -0.8
Sap30O88574 Gm5687-201ENSMUST00000118252 640 ntBASIC10.07□□□□□ -0.8
Sap30O88574 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.07□□□□□ -0.8
Sap30O88574 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.07□□□□□ -0.8
Sap30O88574 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.07□□□□□ -0.8
Sap30O88574 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.07□□□□□ -0.8
Sap30O88574 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.07□□□□□ -0.8
Sap30O88574 Gm9899-201ENSMUST00000065519 555 ntBASIC10.07□□□□□ -0.8
Sap30O88574 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.07□□□□□ -0.8
Sap30O88574 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Sap30O88574 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Sap30O88574 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sap30O88574 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms