Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cops4O88544 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.89□□□□□ -0.51
Cops4O88544 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.89□□□□□ -0.51
Cops4O88544 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Cops4O88544 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.89□□□□□ -0.51
Cops4O88544 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Cops4O88544 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.89□□□□□ -0.51
Cops4O88544 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Gm18905-201ENSMUST00000205454 928 ntBASIC11.89□□□□□ -0.51
Cops4O88544 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cops4O88544 Gm7775-201ENSMUST00000218871 853 ntBASIC11.89□□□□□ -0.51
Cops4O88544 Gm17330-201ENSMUST00000221047 165 ntBASIC11.89□□□□□ -0.51
Cops4O88544 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.89□□□□□ -0.51
Cops4O88544 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.89□□□□□ -0.51
Cops4O88544 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.89□□□□□ -0.51
Cops4O88544 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.89□□□□□ -0.51
Cops4O88544 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cops4O88544 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cops4O88544 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cops4O88544 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.88□□□□□ -0.51
Cops4O88544 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.88□□□□□ -0.51
Cops4O88544 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.88□□□□□ -0.51
Cops4O88544 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Cops4O88544 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.88□□□□□ -0.51
Cops4O88544 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.88□□□□□ -0.51
Cops4O88544 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cops4O88544 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.88□□□□□ -0.51
Cops4O88544 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cops4O88544 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.88□□□□□ -0.51
Cops4O88544 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.88□□□□□ -0.51
Cops4O88544 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cops4O88544 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.87□□□□□ -0.51
Cops4O88544 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cops4O88544 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cops4O88544 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.87□□□□□ -0.51
Cops4O88544 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cops4O88544 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cops4O88544 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cops4O88544 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms