Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm32025-201ENSMUST00000217960 307 ntBASIC12.75□□□□□ -0.37
Pdlim1O70400 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.75□□□□□ -0.37
Pdlim1O70400 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pdlim1O70400 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pdlim1O70400 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.74□□□□□ -0.37
Pdlim1O70400 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.74□□□□□ -0.37
Pdlim1O70400 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim1O70400 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.74□□□□□ -0.37
Pdlim1O70400 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.74□□□□□ -0.37
Pdlim1O70400 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pdlim1O70400 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.73□□□□□ -0.37
Pdlim1O70400 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.73□□□□□ -0.37
Pdlim1O70400 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim1O70400 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.73□□□□□ -0.37
Pdlim1O70400 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.73□□□□□ -0.37
Pdlim1O70400 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.73□□□□□ -0.37
Pdlim1O70400 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.73□□□□□ -0.37
Pdlim1O70400 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.73□□□□□ -0.37
Pdlim1O70400 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdlim1O70400 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.73□□□□□ -0.37
Pdlim1O70400 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim1O70400 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.73□□□□□ -0.37
Pdlim1O70400 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim1O70400 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms