Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Chrna4O70174 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Snord83b-201ENSMUST00000104546 94 ntBASIC12.99□□□□□ -0.33
Chrna4O70174 Gm4984-201ENSMUST00000115987 360 ntBASIC12.99□□□□□ -0.33
Chrna4O70174 Gm13813-201ENSMUST00000120998 787 ntBASIC12.99□□□□□ -0.33
Chrna4O70174 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.99□□□□□ -0.33
Chrna4O70174 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Chrna4O70174 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.99□□□□□ -0.33
Chrna4O70174 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.99□□□□□ -0.33
Chrna4O70174 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.99□□□□□ -0.33
Chrna4O70174 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Chrna4O70174 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chrna4O70174 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.99□□□□□ -0.33
Chrna4O70174 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.98□□□□□ -0.33
Chrna4O70174 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chrna4O70174 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chrna4O70174 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chrna4O70174 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.98□□□□□ -0.33
Chrna4O70174 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Gm22121-201ENSMUST00000175148 54 ntBASIC12.98□□□□□ -0.33
Chrna4O70174 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Gm6266-201ENSMUST00000203844 806 ntBASIC12.98□□□□□ -0.33
Chrna4O70174 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Mir339-201ENSMUST00000083659 96 ntBASIC12.98□□□□□ -0.33
Chrna4O70174 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.98□□□□□ -0.33
Chrna4O70174 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.98□□□□□ -0.33
Chrna4O70174 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Chrna4O70174 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chrna4O70174 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna4O70174 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.97□□□□□ -0.33
Chrna4O70174 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Chrna4O70174 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.97□□□□□ -0.33
Chrna4O70174 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.97□□□□□ -0.33
Chrna4O70174 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.97□□□□□ -0.33
Chrna4O70174 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.97□□□□□ -0.33
Chrna4O70174 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.97□□□□□ -0.33
Chrna4O70174 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.97□□□□□ -0.33
Chrna4O70174 Gm27682-201ENSMUST00000183930 110 ntBASIC12.97□□□□□ -0.33
Chrna4O70174 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.97□□□□□ -0.33
Chrna4O70174 Gm32025-201ENSMUST00000217960 307 ntBASIC12.97□□□□□ -0.33
Chrna4O70174 Gm5186-201ENSMUST00000218781 920 ntBASIC12.97□□□□□ -0.33
Chrna4O70174 Gm19163-201ENSMUST00000223313 780 ntBASIC12.97□□□□□ -0.33
Chrna4O70174 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Chrna4O70174 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna4O70174 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms