Protein–RNA interactions for Protein: O35089

Cnih2, Protein cornichon homolog 2, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih2O35089 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.34□□□□□ -0.59
Cnih2O35089 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cnih2O35089 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cnih2O35089 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.34□□□□□ -0.59
Cnih2O35089 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
Cnih2O35089 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.34□□□□□ -0.59
Cnih2O35089 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cnih2O35089 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cnih2O35089 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cnih2O35089 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Cnih2O35089 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.33□□□□□ -0.6
Cnih2O35089 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.33□□□□□ -0.6
Cnih2O35089 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.33□□□□□ -0.6
Cnih2O35089 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.33□□□□□ -0.6
Cnih2O35089 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Gm5264-201ENSMUST00000190584 848 ntBASIC11.33□□□□□ -0.6
Cnih2O35089 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cnih2O35089 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Cnih2O35089 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cnih2O35089 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cnih2O35089 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.33□□□□□ -0.6
Cnih2O35089 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cnih2O35089 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cnih2O35089 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cnih2O35089 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.32□□□□□ -0.6
Cnih2O35089 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.32□□□□□ -0.6
Cnih2O35089 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cnih2O35089 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cnih2O35089 Gm22065-201ENSMUST00000103753 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm22066-201ENSMUST00000103761 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm24932-201ENSMUST00000103763 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm24115-201ENSMUST00000103799 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm22190-201ENSMUST00000103827 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm22191-201ENSMUST00000103831 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm24721-201ENSMUST00000103849 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm28018-201ENSMUST00000103869 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm26399-201ENSMUST00000103937 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm12403-201ENSMUST00000121384 959 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.32□□□□□ -0.6
Cnih2O35089 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.32□□□□□ -0.6
Cnih2O35089 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cnih2O35089 Gm25349-201ENSMUST00000177728 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm23616-201ENSMUST00000177797 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm25871-201ENSMUST00000177816 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm24752-201ENSMUST00000178240 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm24496-201ENSMUST00000178287 110 ntBASIC11.32□□□□□ -0.6
Cnih2O35089 Gm25649-201ENSMUST00000178476 110 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms