Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Daam2-202ENSMUST00000224595 1926 ntBASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Shisa8J3QNX5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Gm9522-201ENSMUST00000182394 926 ntBASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Gm38144-201ENSMUST00000192790 465 ntBASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa8J3QNX5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.72□□□□□ -0.53
Shisa8J3QNX5 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Gm26464-201ENSMUST00000157094 305 ntBASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.72□□□□□ -0.53
Shisa8J3QNX5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Gm37935-201ENSMUST00000192012 982 ntBASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.72□□□□□ -0.53
Shisa8J3QNX5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms